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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs2334649 chr11:1534614 C/A 8.08E-5 509 5.47 37.37 37.47 KM Plot
KIRC rs2334651 chr11:1535259 A/G 8.08E-5 509 5.47 37.37 37.47 KM Plot
KIRC rs2334652 chr11:1505454 A/G 8.43E-5 507 5.47 37.53 37.33 KM Plot
KIRC rs2341633 chr19:46344485 C/G 7.48E-8 506 38.1 28.17 1.77 KM Plot
KIRC rs2361685 chr3:48239202 T/C 5.86E-5 496 38.52 32.23 19.13 KM Plot
KIRC rs2477719 chr1:117651363 A/C 2.29E-7 509 37.37 37.73 3.37 KM Plot
KIRC rs249932 chr16:23619669 C/T 1.43E-8 503 37.42 37.47 1.62 KM Plot
KIRC rs249937 chr16:23626033 G/A 1.28E-8 504 37.47 37.47 1.62 KM Plot
KIRC rs249942 chr16:23645348 C/A 1.43E-8 502 37.5 37.68 1.62 KM Plot
KIRC rs249955 chr16:23639577 T/C 1.28E-8 504 37.47 37.47 1.62 KM Plot
KIRC rs250582 chr16:23404123 G/A 2.09E-8 499 37.5 33.97 1.62 KM Plot
KIRC rs2541 chr3:48339618 A/G 4.08E-5 505 37.6 37.77 21.12 KM Plot
KIRC rs2629558 chr10:126545779 G/C 3.44E-5 486 39.53 45.77 28.98 KM Plot
KIRC rs264002 chr1:45423943 A/G 9.58E-5 509 36.9 39.62 19.6 KM Plot
KIRC rs2651606 chr3:124365593 A/G 5.96E-5 499 37.03 40 18.7 KM Plot